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page #179 of 200:   2-76332712-76332722-GA_expansion_hunter
LocusId: 2-76332712-76332722-GA
Motif: GA
CanonicalMotif: AG
MotifSize: 2
Genotype: Truth: 10/10
Genotype: ExpansionHunter: with adjacent repeats: 10/10
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 10/29
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 19.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 19.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 0.871158769589269
Verdict: both genotypes bad
Notes:
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2-76332712-76332722-GA_expansion_hunter/CHM1_CHM13_WGS2.2-76332712-76332722-GA.svg