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page #156 of 200:   18-61347287-61347319-AT_expansion_hunter_with_adjacent_loci__max_dist_50bp
LocusId: 18-61347287-61347319-AT
Motif: AT
CanonicalMotif: AT
MotifSize: 2
Genotype: Truth: 13/17
Genotype: ExpansionHunter: with adjacent repeats: 17/19
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 4.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 2.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 6.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 13/17
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: worse with adjacent repeats
Notes:
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18-61347287-61347319-AT_expansion_hunter_with_adjacent_loci__max_dist_50bp/CHM1_CHM13_WGS2.18-61347287-61347319-AT;1_adjacent_repeats;max_dist_0bp.svg