LocusId: 18-61347287-61347319-AT
Motif: AT
CanonicalMotif: AT
MotifSize: 2
Genotype: Truth: 13/17
Genotype: ExpansionHunter: with adjacent repeats: 17/19
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 4.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 2.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 6.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 13/17
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: worse with adjacent repeats
Notes:
18-61347287-61347319-AT_expansion_hunter/CHM1_CHM13_WGS2.18-61347287-61347319-AT.svg
