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page #100 of 200:   13-59177656-59177712-AGGG_expansion_hunter_with_adjacent_loci__max_dist_50bp
LocusId: 13-59177656-59177712-AGGG
Motif: AGGG
CanonicalMotif: AGGG
MotifSize: 4
Genotype: Truth: 9/10
Genotype: ExpansionHunter: with adjacent repeats: 9/15
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 5.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 5.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 9/10
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: both genotypes bad
Notes:
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13-59177656-59177712-AGGG_expansion_hunter_with_adjacent_loci__max_dist_50bp/CHM1_CHM13_WGS2.13-59177656-59177712-AGGG;1_adjacent_repeats;max_dist_0bp.svg