< or [   prev     next   ] or >
  table
page #82 of 200:   11-76849050-76849066-GCTT_expansion_hunter_with_adjacent_loci__max_dist_50bp
LocusId: 11-76849050-76849066-GCTT
Motif: GCTT
CanonicalMotif: AAGC
MotifSize: 4
Genotype: Truth: 4/5
Genotype: ExpansionHunter: with adjacent repeats: 4/5
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 4/8
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 3.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 3.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: better with adjacent repeats
Notes:
Save
11-76849050-76849066-GCTT_expansion_hunter_with_adjacent_loci__max_dist_50bp/CHM1_CHM13_WGS2.11-76849050-76849066-GCTT;3_adjacent_repeats;max_dist_0bp.svg