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page #81 of 200:   11-76849050-76849066-GCTT_expansion_hunter
LocusId: 11-76849050-76849066-GCTT
Motif: GCTT
CanonicalMotif: AAGC
MotifSize: 4
Genotype: Truth: 4/5
Genotype: ExpansionHunter: with adjacent repeats: 4/5
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 4/8
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 3.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 3.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: better with adjacent repeats
Notes:
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11-76849050-76849066-GCTT_expansion_hunter/CHM1_CHM13_WGS2.11-76849050-76849066-GCTT.svg