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page #35 of 200:   1-34942028-34942068-GATA_expansion_hunter
LocusId: 1-34942028-34942068-GATA
Motif: GATA
CanonicalMotif: AGAT
MotifSize: 4
Genotype: Truth: 10/11
Genotype: ExpansionHunter: with adjacent repeats: 11/20
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 1.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 9.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 10.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 10/11
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: both genotypes bad
Notes:
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1-34942028-34942068-GATA_expansion_hunter/CHM1_CHM13_WGS2.1-34942028-34942068-GATA.svg