LocusId: 4-8717608-8717620-AAAG
Motif: AAAG
CanonicalMotif: AAAG
MotifSize: 4
Genotype: Truth: 2/2
Genotype: ExpansionHunter: with adjacent repeats: 2/2
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 2/21
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 19.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 19.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: both genotypes bad
Notes:
4-8717608-8717620-AAAG_expansion_hunter/CHM1_CHM13_WGS2.4-8717608-8717620-AAAG.svg
