LocusId: 4-11055139-11055194-TTTAT
Motif: TTTAT
CanonicalMotif: AAAAT
MotifSize: 5
Genotype: Truth: 12/12
Genotype: ExpansionHunter: with adjacent repeats: 12/12
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 12/22
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 10.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 10.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: both genotypes bad
Notes:
4-11055139-11055194-TTTAT_expansion_hunter/CHM1_CHM13_WGS2.4-11055139-11055194-TTTAT.svg
