LocusId: 3-128469988-128470004-CACCCAGC
Motif: CACCCAGC
CanonicalMotif: ACCCAGCC
MotifSize: 8
Genotype: Truth: 2/3
Genotype: ExpansionHunter: with adjacent repeats: 2/3
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 3/17
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 1.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 14.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 15.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: both genotypes bad
Notes:
3-128469988-128470004-CACCCAGC_expansion_hunter/CHM1_CHM13_WGS2.3-128469988-128470004-CACCCAGC.svg
