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page #186 of 200:   21-16448773-16448797-AC_expansion_hunter_with_adjacent_loci__max_dist_50bp
LocusId: 21-16448773-16448797-AC
Motif: AC
CanonicalMotif: AC
MotifSize: 2
Genotype: Truth: 12/13
Genotype: ExpansionHunter: with adjacent repeats: 12/13
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 13/20
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 1.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 7.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 8.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: both genotypes bad
Notes:
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21-16448773-16448797-AC_expansion_hunter_with_adjacent_loci__max_dist_50bp/CHM1_CHM13_WGS2.21-16448773-16448797-AC;1_adjacent_repeats;max_dist_0bp.svg