LocusId: 20-58688638-58688648-GT
Motif: GT
CanonicalMotif: AC
MotifSize: 2
Genotype: Truth: 3/5
Genotype: ExpansionHunter: with adjacent repeats: 3/5
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 3/65
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 60.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 60.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: both genotypes bad
Notes:
20-58688638-58688648-GT_expansion_hunter/CHM1_CHM13_WGS2.20-58688638-58688648-GT.svg
