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page #175 of 200:   2-50219985-50219993-TA_expansion_hunter
LocusId: 2-50219985-50219993-TA
Motif: TA
CanonicalMotif: AT
MotifSize: 2
Genotype: Truth: 4/5
Genotype: ExpansionHunter: with adjacent repeats: 4/5
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 5/10
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 1.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 5.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 6.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: both genotypes bad
Notes:
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2-50219985-50219993-TA_expansion_hunter/CHM1_CHM13_WGS2.2-50219985-50219993-TA.svg