LocusId: 2-208534158-208534192-AT
Motif: AT
CanonicalMotif: AT
MotifSize: 2
Genotype: Truth: 18/20
Genotype: ExpansionHunter: with adjacent repeats: 18/20
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 18/56
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 36.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 36.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: both genotypes bad
Notes:
2-208534158-208534192-AT_expansion_hunter/CHM1_CHM13_WGS2.2-208534158-208534192-AT.svg
