LocusId: 18-35157151-35157181-GGGAA
Motif: GGGAA
CanonicalMotif: AAGGG
MotifSize: 5
Genotype: Truth: 5/5
Genotype: ExpansionHunter: with adjacent repeats: 5/5
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 5/17
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 12.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 12.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: both genotypes bad
Notes:
18-35157151-35157181-GGGAA_expansion_hunter/CHM1_CHM13_WGS2.18-35157151-35157181-GGGAA.svg
