LocusId: 16-60884902-60884912-TA
Motif: TA
CanonicalMotif: AT
MotifSize: 2
Genotype: Truth: 6/6
Genotype: ExpansionHunter: with adjacent repeats: 7/68
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 1.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 62.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 63.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 0.8890097654027755
Genotype: ExpansionHunter: no adjacent repeats: 6/6
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: both genotypes bad
Notes:
16-60884902-60884912-TA_expansion_hunter/CHM1_CHM13_WGS2.16-60884902-60884912-TA.svg
