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page #118 of 200:   14-88089695-88089743-AAG_expansion_hunter_with_adjacent_loci__max_dist_50bp
LocusId: 14-88089695-88089743-AAG
Motif: AAG
CanonicalMotif: AAG
MotifSize: 3
Genotype: Truth: 11/12
Genotype: ExpansionHunter: with adjacent repeats: 9/11
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: -2.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: -1.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 3.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 11/12
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: better with adjacent repeats
Notes:
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14-88089695-88089743-AAG_expansion_hunter_with_adjacent_loci__max_dist_50bp/CHM1_CHM13_WGS2.14-88089695-88089743-AAG;1_adjacent_repeats;max_dist_0bp.svg