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page #78 of 200:   11-48254906-48254942-TG_expansion_hunter_with_adjacent_loci__max_dist_50bp
LocusId: 11-48254906-48254942-TG
Motif: TG
CanonicalMotif: AC
MotifSize: 2
Genotype: Truth: 15/16
Genotype: ExpansionHunter: with adjacent repeats: 13/13
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: -2.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: -3.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 5.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 15/16
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: better with adjacent repeats
Notes:
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11-48254906-48254942-TG_expansion_hunter_with_adjacent_loci__max_dist_50bp/CHM1_CHM13_WGS2.11-48254906-48254942-TG;1_adjacent_repeats;max_dist_0bp.svg