LocusId: 11-25413725-25413739-AT
Motif: AT
CanonicalMotif: AT
MotifSize: 2
Genotype: Truth: 6/6
Genotype: ExpansionHunter: with adjacent repeats: 6/17
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 11.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 11.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 6/6
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: both genotypes bad
Notes:
11-25413725-25413739-AT_expansion_hunter/CHM1_CHM13_WGS2.11-25413725-25413739-AT.svg
