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page #58 of 200:   10-21227711-21227768-TTC_expansion_hunter_with_adjacent_loci__max_dist_50bp
LocusId: 10-21227711-21227768-TTC
Motif: TTC
CanonicalMotif: AAG
MotifSize: 3
Genotype: Truth: 18/19
Genotype: ExpansionHunter: with adjacent repeats: 18/19
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 18/24
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 5.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 5.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 0.8464817248906141
Verdict: better with adjacent repeats
Notes:
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10-21227711-21227768-TTC_expansion_hunter_with_adjacent_loci__max_dist_50bp/CHM1_CHM13_WGS2.10-21227711-21227768-TTC;1_adjacent_repeats;max_dist_0bp.svg