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page #52 of 200:   10-108465707-108465747-TAAA_expansion_hunter_with_adjacent_loci__max_dist_50bp
LocusId: 10-108465707-108465747-TAAA
Motif: TAAA
CanonicalMotif: AAAT
MotifSize: 4
Genotype: Truth: 7/10
Genotype: ExpansionHunter: with adjacent repeats: 4/10
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: -3.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 3.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 7/10
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: better with adjacent repeats
Notes:
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10-108465707-108465747-TAAA_expansion_hunter_with_adjacent_loci__max_dist_50bp/CHM1_CHM13_WGS2.10-108465707-108465747-TAAA;1_adjacent_repeats;max_dist_0bp.svg