LocusId: 1-26595384-26595432-CCCTGC
Motif: CCCTGC
CanonicalMotif: AGGGGC
MotifSize: 6
Genotype: Truth: 7/7
Genotype: ExpansionHunter: with adjacent repeats: 7/11
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 4.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 4.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 7/7
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: worse with adjacent repeats
Notes:
1-26595384-26595432-CCCTGC_expansion_hunter/CHM1_CHM13_WGS2.1-26595384-26595432-CCCTGC.svg
