page #1 of 200: 1-100351973-100352003-GT_expansion_hunter
LocusId: 1-100351973-100352003-GT
Motif: GT
CanonicalMotif: AC
MotifSize: 2
Genotype: Truth: 14/15
Genotype: ExpansionHunter: with adjacent repeats: 14/15
DiffRepeats: Allele 1: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: with adjacent repeats: 0.0
Q: Allele 1: ExpansionHunter: with adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: with adjacent repeats: 1.0
Genotype: ExpansionHunter: no adjacent repeats: 14/18
DiffRepeats: Allele 1: ExpansionHunter - Truth: no adjacent repeats: 0.0
DiffRepeats: Allele 2: ExpansionHunter - Truth: no adjacent repeats: 3.0
DiffRepeats: Allele 1 + 2: ExpansionHunter - Truth: no adjacent repeats: 3.0
Q: Allele 1: ExpansionHunter: no adjacent repeats: 1.0
Q: Allele 2: ExpansionHunter: no adjacent repeats: 1.0
Verdict: better with adjacent repeats
Notes:
1-100351973-100352003-GT_expansion_hunter/CHM1_CHM13_WGS2.1-100351973-100352003-GT.svg